Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922783.1_cds_XP_016471547.1_63877
CDS Infomation

[gene=LOC107793666] [db_xref=GeneID:107793666] [protein=vetispiradiene synthase 2-like] [protein_id=XP_016471547.1] [location=complement(join(1661..1957,2062..2307,2467..2605,2740..2958,3048..3423,3523..3796,3897..4013))] [gbkey=CDS]
Sequence

ATGTCCCGAGGCAATAATATTGTGAAGCATGAAGAAGAAGAGATCGTTCGCCCCGTCGCC
AACTTCTCTCCTAGTCTATGGGCTGATCAGTTCCATTCATTCTCCTTTGACAATCAAGTT
GCAGAAAAATATGCTCAAGAGATTGAAGTATTGAAGGAACAAACAAGGAGCATGTTATTA
GCTACTGGACAGAAATTGGATGAGACAATGAATTTGATAGATGTTATTGAACGCCTTGGC
ATTGGCTACCATTTTGAGAAAGAGATTGATGAGATTTTAGAGCATATTTACAATGAAAAT
ACAAATTTTGAGGGTGATGATTATAATGATTTATGTACTTCTGCACTTCAATTTCGATTG
TTTAGGCAACATGGTTACAACATTTCTCCTGAAATTTTCAGCAAATTCCAAGATGAAAAT
GGCAAATTCAAGGAGTCTCTTGCTAGTGATGTCTTAGGATTATTGAGCTTGTATGAAGCT
TCATATGTAAGGACTCATGCTGACGATATCTTAAAAGACGCACTTGCTTTCTCCACTATC
CATCTTGAATCTGTAGCTCCACATTTTAAATCTCCACTTAGGGAGCAAGTGACACATGCC
CTTGAGCAATGTTTGCACAAGGGCGTTCCTAGACTAGAGACACGATTCTTCATCTCATCA
ATTTACGAGAAGGAGGAATCAAAGAATGACATGTTACTTCGATTTGCCAAATTGGATTTT
AACTTGCTTCAGATGTTGCACAAACAAGAACTTGCTGAAGTATCAAGGTGGTGGAAAGAT
TTGGATTTTGTGACAACACTTCCATATGCTAGAGACAGGGCAGTAGAATGTTACTTTTGG
ACAATAGGAGTATATTTCGAGCCTCAATATTCTCAAGCTCGTGTCATGCTTGCTAAGACT
ATAGCGATGATTTCAATCGTTGATGACACATTTGACGTTTATGGTATAGTTAAAGAACTT
GACATATACACGGATGCCATACAAAGGTGGGATGTTAGTGAAATTGATCGACTTCCTGAT
TACATGAAAATCAGTTATAAAGCTCTTTTAAATCTTTACGACGACTATGAAAAGGAATTA
TCCAATTATGGAAGATCTAATGTTGTCTACTATGCGAAAGAAAGAATGAAAGAAATAGTA
AGGAATTATAACGTTGAGGCGAAGTGGTTTATTGAAGGATATATGCCACCTGTCTCTGAG
TACTTGAGCAACGCATTAATAACTAGCACTTATTACTTGTTAACTACAACGTCCTATTTG
GCCATGAAATCTGTTACCAAGAAGGATTTTGAGTGGTTAGCAAAGAACCCTAAAATTCTT
GAAGCTAATGTAACATTATGCAGAGTTATTGATGATATAGCGACGTACGAGGTCGAAAAA
AGTAGGGGTCAAATTGCAACAGGAATTGAGTGTTACATGAGAGATTATGGTGTATCTACT
GAAGAAGCAATGAATAAATTTCAAGAAATGGCTGAAATAGCATGGAAGGATGTAAATGAA
GGAATTCTTAGACCAACTCCTGTCTCTACAGAGATTTTAACTCGTATTCTCAATCTTTCT
CGCATGATTGACGTCGCATATAAGAACAATCAAGATGGATACACTCATCCGGAGAAAGTC
GTAAAGCCTCATATTATTGCCCTACTTGTGGACTCCATCAAAGTTTAA

Peptide Sequence

PEP ID

XP_016471547.1
PEP Infomation

PREDICTED: vetispiradiene synthase 2-like [Nicotiana tabacum]
Sequence

MSRGNNIVKHEEEEIVRPVANFSPSLWADQFHSFSFDNQVAEKYAQEIEVLKEQTRSMLL
ATGQKLDETMNLIDVIERLGIGYHFEKEIDEILEHIYNENTNFEGDDYNDLCTSALQFRL
FRQHGYNISPEIFSKFQDENGKFKESLASDVLGLLSLYEASYVRTHADDILKDALAFSTI
HLESVAPHFKSPLREQVTHALEQCLHKGVPRLETRFFISSIYEKEESKNDMLLRFAKLDF
NLLQMLHKQELAEVSRWWKDLDFVTTLPYARDRAVECYFWTIGVYFEPQYSQARVMLAKT
IAMISIVDDTFDVYGIVKELDIYTDAIQRWDVSEIDRLPDYMKISYKALLNLYDDYEKEL
SNYGRSNVVYYAKERMKEIVRNYNVEAKWFIEGYMPPVSEYLSNALITSTYYLLTTTSYL
AMKSVTKKDFEWLAKNPKILEANVTLCRVIDDIATYEVEKSRGQIATGIECYMRDYGVST
EEAMNKFQEMAEIAWKDVNEGILRPTPVSTEILTRILNLSRMIDVAYKNNQDGYTHPEKV
VKPHIIALLVDSIKV

Transcript Sequence

Gene sequence data has not been registered.